Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine decarboxylase | A9819_17045 | Not Available | Negative | 3289401 - 3291536 | 79533.7 |
| hypothetical protein | A9819_17050 | Not Available | Negative | 3291617 - 3291820 | 7567.3 |
| transporter | A9819_17055 | Not Available | Positive | 3291935 - 3292642 | 24661.6 |
| Trna-phe | Not Available | Not Available | Positive | 3292748 - 3292823 | Not Available |
| general secretion pathway protein | A9819_17065 | Not Available | Negative | 3292972 - 3293508 | 20429.8 |
| type ii secretion system protein gspl | A9819_17070 | Not Available | Negative | 3293510 - 3294688 | 44144.1 |
| type ii secretion system protein | A9819_17075 | Not Available | Negative | 3294685 - 3295662 | 36557.3 |
| type ii secretion system protein gspj | A9819_17080 | Not Available | Negative | 3295659 - 3296264 | 22462.5 |
| type ii secretion system protein gspi | A9819_17085 | Not Available | Negative | 3296261 - 3296632 | 13590.3 |
| type ii secretion system protein gspg | A9819_17095 | Not Available | Negative | 3297197 - 3297679 | 17798.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





