Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argp/lysg family dna-binding transcriptional regulator | A9819_16735 | Not Available | Positive | 3234752 - 3235645 | 33445.6 |
| methylmalonyl-coa mutase | A9819_16745 | Not Available | Positive | 3235849 - 3237993 | 77838.6 |
| methylmalonyl co-a mutase-associated gtpase meab | A9819_16750 | Not Available | Positive | 3237986 - 3238981 | 36692.1 |
| methylmalonyl-coa decarboxylase | A9819_16755 | Not Available | Positive | 3238992 - 3239777 | 29146.3 |
| acetyl-coa hydrolase | A9819_16760 | Not Available | Positive | 3239801 - 3241279 | 53858.6 |
| lysr family transcriptional regulator | A9819_16765 | Not Available | Negative | 3241276 - 3242172 | 34675.7 |
| oxidative stress defense protein | A9819_16770 | Not Available | Negative | 3242339 - 3243079 | 26636.7 |
| arginine exporter argo | A9819_16775 | Not Available | Negative | 3243172 - 3243807 | 23141.0 |
| hypothetical protein | A9819_16780 | Not Available | Positive | 3244002 - 3244931 | 35404.4 |
| abc transporter substrate-binding protein | A9819_16785 | Not Available | Positive | 3244986 - 3246029 | 39303.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





