Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase (fe-s)-binding subunit | A9819_16570 | Not Available | Negative | 3205033 - 3206952 | 69074.9 |
| purine permease ygfu | A9819_16575 | Not Available | Positive | 3207255 - 3207341 | 3132.76 |
| uric acid transporter uact | A9819_16580 | Not Available | Positive | 3207388 - 3208836 | 51761.4 |
| hypothetical protein | A9819_16585 | Not Available | Positive | 3208838 - 3208963 | 4791.29 |
| isopentenyl-diphosphate delta-isomerase | A9819_16590 | Not Available | Positive | 3209086 - 3209634 | 20555.4 |
| lysine--trna ligase | A9819_16595 | Not Available | Negative | 3209677 - 3211194 | 57620.8 |
| single-stranded-dna-specific exonuclease recj | A9819_16605 | Not Available | Negative | 3212393 - 3214126 | 63379.6 |
| thiol:disulfide interchange protein dsbc | A9819_16610 | Not Available | Negative | 3214132 - 3214842 | 25623.1 |
| site-specific tyrosine recombinase xerd | A9819_16615 | Not Available | Negative | 3214867 - 3215763 | 34248.4 |
| flavodoxin-2 | A9819_16620 | Not Available | Positive | 3215875 - 3216396 | 19701.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





