Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative selenium-dependent hydroxylase accessory protein yqec | A9819_16520 | Not Available | Negative | 3190308 - 3191078 | 28153.1 |
| molybdenum cofactor cytidylyltransferase | A9819_16525 | Not Available | Positive | 3191181 - 3191759 | 21527.3 |
| putative selenate reductase subunit ygfk | A9819_16530 | Not Available | Positive | 3192081 - 3195179 | 115664.0 |
| chlorohydrolase | A9819_16535 | Not Available | Positive | 3195182 - 3196510 | 48850.2 |
| molybdopterin-dependent oxidoreductase fad-binding subunit | A9819_16540 | Not Available | Positive | 3196561 - 3197340 | 28623.2 |
| molybdopterin-dependent oxidoreductase mo/fe-s-binding subunit | A9819_16545 | Not Available | Positive | 3197337 - 3200207 | 103525.0 |
| xanthine permease xanq | A9819_16550 | Not Available | Positive | 3200372 - 3201772 | 49111.5 |
| guanine deaminase | A9819_16555 | Not Available | Positive | 3201787 - 3203106 | 50262.0 |
| permease | A9819_16560 | Not Available | Positive | 3203142 - 3204509 | 46791.0 |
| effector protein | A9819_16565 | Not Available | Negative | 3204545 - 3205033 | 17544.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





