Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A9819_16355 | Not Available | Negative | 3155124 - 3156263 | 42828.6 |
| hypothetical protein | A9819_16365 | Not Available | Positive | 3157160 - 3157702 | 20215.8 |
| hypothetical protein | A9819_16370 | Not Available | Positive | 3158202 - 3158351 | 5619.06 |
| hypothetical protein | A9819_16375 | Not Available | Negative | 3158661 - 3158870 | 7944.56 |
| integrase | A9819_16380 | Not Available | Negative | 3159050 - 3161002 | 73328.0 |
| antitermination protein | A9819_16385 | Not Available | Negative | 3161854 - 3162246 | 14790.0 |
| hypothetical protein | A9819_16390 | Not Available | Positive | 3162303 - 3162491 | 7103.67 |
| restriction endonuclease | A9819_16395 | Not Available | Negative | 3163921 - 3164982 | 40554.8 |
| dna cytosine methyltransferase | A9819_16400 | Not Available | Negative | 3164933 - 3166072 | 43381.8 |
| single-stranded dna-binding protein | A9819_16405 | Not Available | Negative | 3166297 - 3166746 | 15837.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





