Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cesd/sycd/lcrh family type iii secretion system chaperone | A9819_16190 | Not Available | Positive | 3128987 - 3129478 | 18960.0 |
| transcriptional regulator | A9819_16200 | Not Available | Positive | 3129812 - 3131188 | 52619.6 |
| hypothetical protein | A9819_16205 | Not Available | Positive | 3131356 - 3131574 | 8076.32 |
| lytic transglycosylase | A9819_16210 | Not Available | Positive | 3131657 - 3132160 | 19288.8 |
| luxr family transcriptional regulator | A9819_16215 | Not Available | Negative | 3132179 - 3132811 | 23399.6 |
| hypothetical protein | A9819_16220 | Not Available | Negative | 3133034 - 3133465 | 16882.1 |
| type iii secretion apparatus protein orga/mxik | A9819_16230 | Not Available | Negative | 3133682 - 3134263 | 22722.8 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | A9819_16235 | Not Available | Negative | 3134279 - 3135013 | 27609.7 |
| hypothetical protein | A9819_16240 | Not Available | Negative | 3135010 - 3135270 | 9652.57 |
| type iii secretion system needle complex protein | A9819_16245 | Not Available | Negative | 3135362 - 3135601 | 9038.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





