Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A9819_15515 | Not Available | Positive | 2991359 - 2991667 | 11353.7 |
| formate hydrogenlyase regulatory protein hyca | A9819_15520 | Not Available | Negative | 2991583 - 2992044 | 17627.9 |
| protein hypa | A9819_15525 | Not Available | Positive | 2992256 - 2992606 | 13168.9 |
| hydrogenase accessory protein hypb | A9819_15530 | Not Available | Positive | 2992610 - 2993482 | 31596.9 |
| hydrogenase assembly protein hypc | A9819_15535 | Not Available | Positive | 2993473 - 2993745 | 9732.58 |
| hydrogenase formation protein hypd | A9819_15540 | Not Available | Positive | 2993745 - 2994866 | 41366.7 |
| hydrogenase expression/formation protein hype | A9819_15545 | Not Available | Positive | 2994863 - 2995873 | 35096.6 |
| formate hydrogenlyase transcriptional activator flha | A9819_15550 | Not Available | Positive | 2995947 - 2998025 | 78447.5 |
| nitrous oxide-stimulated promoter family protein | A9819_15555 | Not Available | Negative | 2998062 - 2998415 | 13960.3 |
| dna mismatch repair protein muts | A9819_15560 | Not Available | Positive | 2998702 - 3001263 | 95224.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





