Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Terminase endonuclease subunit | A9819_11460 | Not Available | Positive | 2167244 - 2168044 | 28888.4 |
| Head completion-stabilization protein | A9819_11465 | Not Available | Positive | 2168147 - 2168641 | 18348.5 |
| Tail protein x | A9819_11470 | Not Available | Positive | 2168641 - 2168841 | 7479.97 |
| Holin family protein | A9819_11475 | Not Available | Positive | 2168844 - 2169167 | 11376.8 |
| M15 family metallopeptidase | A9819_11480 | Not Available | Positive | 2169164 - 2169556 | 14716.5 |
| Duf2570 domain-containing protein | A9819_11485 | Not Available | Positive | 2169553 - 2169960 | 14837.4 |
| Tail completion protein | A9819_11490 | Not Available | Positive | 2170098 - 2170565 | 17755.8 |
| Tail protein | A9819_11495 | Not Available | Positive | 2170558 - 2171193 | 24689.4 |
| Baseplate assembly protein v | A9819_11500 | Not Available | Positive | 2171190 - 2171771 | 20082.8 |
| Lysozyme family baseplate assembly protein | A9819_11505 | Not Available | Positive | 2171768 - 2172118 | 12863.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





