Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | A9819_03970 | Not Available | Negative | 789528 - 790199 | 25018.1 |
| atp-dependent rna helicase rhle | A9819_03975 | Not Available | Positive | 790428 - 791795 | 50049.5 |
| type iii effector | A9819_03980 | Not Available | Positive | 793890 - 795902 | 76776.0 |
| atp-dependent dna helicase ding | A9819_03990 | Not Available | Positive | 796186 - 798336 | 81461.9 |
| dna-binding protein ybib | A9819_03995 | Not Available | Positive | 798364 - 799326 | 35046.7 |
| malate/lactate/ureidoglycolate dehydrogenase | A9819_04000 | Not Available | Positive | 799467 - 800552 | 38938.4 |
| hypothetical protein | A9819_04005 | Not Available | Negative | 800692 - 800952 | 8568.2 |
| dksa/trar family c4-type zinc finger protein | A9819_04010 | Not Available | Negative | 801217 - 801483 | 9804.42 |
| pkhd-type hydroxylase | A9819_04015 | Not Available | Negative | 801557 - 802234 | 25557.2 |
| hypothetical protein | A9819_04025 | Not Available | Negative | 804822 - 805226 | 14715.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





