Escherichia coli strain KCJK3945

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain KCJK3945 is a Gram-negative, rod-shaped bacterium characterized by its occurrence in pairs and singles. This strain thrives optimally at a temperature of 37.0°C, aligning with the typical human body temperature, which suggests its potential association with warm-blooded hosts. As a facultative anaerobe, E. coli strain KCJK3945 can survive in both aerobic and anaerobic environments, allowing it to adapt to varying conditions within its host-associated habitat. The Gram-negative nature of this strain indicates the presence of an outer membrane, which plays a critical role in its interactions with the host's immune system and may influence its physiological responses. The rod shape of E. coli facilitates motility and colonization, which are essential for its survival and function within host environments. Given its habitat, E. coli strain KCJK3945 may contribute to the complex microbiota of the gastrointestinal tract, where it can play roles in nutrient absorption and synthesis of essential vitamins. The ability to thrive in both oxygen-rich and oxygen-poor areas of the gut suggests a versatile metabolic capacity, which may help maintain its presence and function in diverse microenvironments. The ecological significance of E. coli strain KCJK3945 may extend to its interactions with other microbial species, contributing to the overall homeostasis of the gut microbiome.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain KCJK3945

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain KCJK3945
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain KCJK3945


Gene Summary

Adenine Count

1350016 bp

Thymine Count

1350628 bp

Guanine Count

1359613 bp

Cytosine Count

1366917 bp

Genome Length

5427174 bp

Protein-coding Genes

5060 genes

Non-Coding Genes

372 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+268144 - 268155Not Available
IntegraseA9819_01305Not Available-270442 - 27138036111.5
ExcisionaseA9819_01310Not Available-271482 - 27183213000.5
Hypothetical proteinA9819_01315Not Available-271832 - 27213712147.5
Hypothetical proteinA9819_01320Not Available-272137 - 27249913672.3
Hypothetical proteinA9819_01325Not Available-272490 - 27302620258.4
Hypothetical proteinA9819_01330Not Available-273154 - 27397830402.0
Hypothetical proteinA9819_01335Not Available-274044 - 27440613088.6
Hypothetical proteinA9819_01340Not Available+274479 - 2747038022.64
Hypothetical proteinA9819_01345Not Available+274612 - 2748669767.97

Displaying genes 1 – 10 of 5432 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites