Sphingomonas lenta strain 1PNM-20

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas lenta strain 1PNM-20 is a rod-shaped bacterium characterized by the presence of flagella, which suggests it has motility capabilities. This strain is notable for its genomic simplicity, possessing a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number NSLI00000000.1, which provides a reference point for researchers interested in its genetic makeup and potential applications. The presence of flagella is significant as it enables the organism to navigate through its habitat, which could be crucial for survival in competitive microbial communities. From a biological or ecological perspective, the motility of Sphingomonas lenta strain 1PNM-20 may enhance its ability to colonize specific niches, interact with other microorganisms, and participate in biogeochemical processes. This can have implications for nutrient cycling and the microbial dynamics within its ecosystem. Understanding such traits is vital for exploring the potential roles of Sphingomonas lenta in environmental bioremediation or in symbiotic relationships with other organisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas lenta
Strainstrain 1PNM-20

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas lenta strain 1PNM-20
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas lenta strain 1PNM-20 contig10, whole genome shotgun

Gene Summary

Adenine Count

567013 bp

Thymine Count

566666 bp

Guanine Count

1331670 bp

Cytosine Count

1292076 bp

Genome Length

3757425 bp

Protein-coding Genes

3508 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cation transporterCKY28_06060Not AvailableNegative1238316 - 123923332386.4
cation transporterCKY28_06065Not AvailableNegative1239230 - 123983821142.9
cusa/czca family heavy metal efflux rnd transporterCKY28_06070Not AvailableNegative1239835 - 1243062114749.0
efflux transporter periplasmic adaptor subunitCKY28_06075Not AvailableNegative1243066 - 124423839777.2
transporterCKY28_06080Not AvailableNegative1244235 - 124550043709.5
hypothetical proteinCKY28_06085Not AvailableNegative1245564 - 124591712271.7
cation transporterCKY28_06090Not AvailableNegative1245919 - 124658122666.8
merr family transcriptional regulatorCKY28_06095Not AvailablePositive1246617 - 124705115830.0
prevent-host-death proteinCKY28_06100Not AvailablePositive1247660 - 124794110405.3
hypothetical proteinCKY28_06105Not AvailablePositive1247874 - 124833517048.3

Displaying genes 1241 – 1250 of 3579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.