Halovibrio salipaludis strain YL5-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Halovibrio

Description

Halovibrio salipaludis strain YL5-2 is characterized by having a single replicon, indicating a streamlined genomic structure typically associated with efficient replication and stability within its environment. The strain is cataloged under the accession number NSKD00000000.1, which provides a reference for further genetic and taxonomic studies. The specific traits of Halovibrio salipaludis suggest that it may be well-adapted to its ecological niche, likely involving saline environments given its genus designation. Members of the Halovibrio genus are known for their halophilic characteristics, often thriving in high-salinity conditions. This adaptability may confer ecological advantages in fluctuating environments where salinity levels can vary considerably. Understanding the genomic features and ecological adaptations of Halovibrio salipaludis strain YL5-2 can offer insights into its potential roles in biogeochemical cycles within saline ecosystems. The presence of a single replicon may enhance its capacity for rapid adaptation and survival in extreme conditions, which is crucial for maintaining microbial diversity and function in such habitats. The study of this strain could further elucidate the mechanisms that enable microbial life to persist in environments with high salinity, contributing to our broader understanding of microbial ecology and evolution.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusHalovibrio
SpeciesHalovibrio salipaludis
Strainstrain YL5-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halovibrio salipaludis strain YL5-2 contig32, whole genome shotgun

Gene Summary

Adenine Count

669046 bp

Thymine Count

655437 bp

Guanine Count

1073398 bp

Cytosine Count

1097215 bp

Genome Length

3495096 bp

Protein-coding Genes

3235 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chloride channel proteinCK501_00145Not AvailablePositive22058 - 2386964562.8
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylaseCK501_00150Not AvailableNegative23870 - 2514746820.8
2-octaprenyl-6-methoxyphenyl hydroxylaseCK501_00155Not AvailableNegative25140 - 2639344937.0
xaa-pro aminopeptidaseCK501_00160Not AvailableNegative26386 - 2772949938.9
yeca family proteinCK501_00165Not AvailableNegative27742 - 2835623070.6
tigr02449 family proteinCK501_00170Not AvailablePositive28504 - 287108261.87
cell division protein zapaCK501_00175Not AvailablePositive28710 - 2902411613.6
Ncrna_class:otherNot AvailableNot AvailablePositive29079 - 29266Not Available
5-formyltetrahydrofolate cyclo-ligaseCK501_00185Not AvailablePositive29291 - 2991123804.8
threonine ammonia-lyase, biosyntheticCK501_00190Not AvailableNegative30248 - 3176555848.5

Displaying genes 31 – 40 of 3290 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.