Halovibrio salipaludis strain YL5-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Halovibrio

Description

Halovibrio salipaludis strain YL5-2 is characterized by having a single replicon, indicating a streamlined genomic structure typically associated with efficient replication and stability within its environment. The strain is cataloged under the accession number NSKD00000000.1, which provides a reference for further genetic and taxonomic studies. The specific traits of Halovibrio salipaludis suggest that it may be well-adapted to its ecological niche, likely involving saline environments given its genus designation. Members of the Halovibrio genus are known for their halophilic characteristics, often thriving in high-salinity conditions. This adaptability may confer ecological advantages in fluctuating environments where salinity levels can vary considerably. Understanding the genomic features and ecological adaptations of Halovibrio salipaludis strain YL5-2 can offer insights into its potential roles in biogeochemical cycles within saline ecosystems. The presence of a single replicon may enhance its capacity for rapid adaptation and survival in extreme conditions, which is crucial for maintaining microbial diversity and function in such habitats. The study of this strain could further elucidate the mechanisms that enable microbial life to persist in environments with high salinity, contributing to our broader understanding of microbial ecology and evolution.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusHalovibrio
SpeciesHalovibrio salipaludis
Strainstrain YL5-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halovibrio salipaludis strain YL5-2 contig32, whole genome shotgun

Gene Summary

Adenine Count

669046 bp

Thymine Count

655437 bp

Guanine Count

1073398 bp

Cytosine Count

1097215 bp

Genome Length

3495096 bp

Protein-coding Genes

3235 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
response regulatorCK501_07460Not AvailablePositive1575669 - 157670337435.6
diguanylate cyclaseCK501_07465Not AvailablePositive1576700 - 157767736475.3
nad-glutamate dehydrogenaseCK501_07470Not AvailableNegative1577667 - 1582532184623.0
hypothetical proteinCK501_07475Not AvailablePositive1582622 - 158442767511.3
c-type cytochrome biogenesis protein ccmiCK501_07480Not AvailableNegative1584424 - 158535334016.1
cytochrome c-type biogenesis protein ccmhCK501_07485Not AvailableNegative1585376 - 158584917930.7
dsbe family thiol:disulfide interchange proteinCK501_07490Not AvailableNegative1585824 - 158635719885.6
heme lyase nrfefg subunit nrfeCK501_07495Not AvailableNegative1586354 - 158835773484.8
cytochrome c maturation protein ccmeCK501_07500Not AvailableNegative1588394 - 158888517769.3
heme exporter protein ccmdCK501_07505Not AvailableNegative1588869 - 15890847812.5

Displaying genes 1491 – 1500 of 3290 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.