Vibrio sp. V1B V1B_115

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. V1B, identified by the accession NRQQ00000000.1, is characterized by having a single replicon. This trait suggests a streamlined genomic organization, which can impact its metabolic capabilities and adaptability in various environments. Vibrio species are typically known for their aquatic habitats, often thriving in marine and estuarine environments. Their single-replicon structure may allow for efficient replication and regulation of essential genes, potentially aiding in their survival under fluctuating environmental conditions. The specific traits of Vibrio sp. V1B highlight its potential role in aquatic ecosystems. Given the ecological significance of Vibrio species in biogeochemical cycles, including nutrient recycling and interactions with other microorganisms, V1B may contribute to the microbial diversity and functionality within its habitat. Understanding the genomic characteristics of Vibrio sp. V1B could provide insights into its ecological roles and interactions in marine ecosystems. The study of such organisms is crucial for comprehending the dynamics of microbial communities and their contributions to ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. V1B
StrainV1B_115

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. V1B V1B_115
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. V1B V1B_115, whole genome shotgun sequence.

Gene Summary

Adenine Count

1612545 bp

Thymine Count

1604616 bp

Guanine Count

1312347 bp

Cytosine Count

1329464 bp

Genome Length

5858972 bp

Protein-coding Genes

5232 genes

Non-Coding Genes

40 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
poly(a) polymeraseB6K85_02785Not AvailableNegative613913 - 61527452829.2
glutamyl-q trna(asp) ligaseB6K85_02790Not AvailableNegative615382 - 61624532269.5
rna polymerase-binding protein dksaB6K85_02795Not AvailableNegative616334 - 61678017193.4
dna/rna nuclease sfsaB6K85_02800Not AvailableNegative616917 - 61763326435.3
atp-dependent helicase hrpbB6K85_02805Not AvailablePositive617701 - 62016991348.0
penicillin-binding protein 1bB6K85_02810Not AvailablePositive620162 - 62255289694.8
serine proteaseB6K85_02815Not AvailablePositive622640 - 62495286261.5
aconitate hydratase bB6K85_02820Not AvailablePositive625222 - 62781093759.9
hypothetical proteinB6K85_02825Not AvailablePositive628088 - 62845613973.4
p-ii family nitrogen regulatorB6K85_02830Not AvailablePositive628645 - 62898312376.0

Displaying genes 551 – 560 of 5272 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.