Vibrio sp. V1B V1B_115

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. V1B, identified by the accession NRQQ00000000.1, is characterized by having a single replicon. This trait suggests a streamlined genomic organization, which can impact its metabolic capabilities and adaptability in various environments. Vibrio species are typically known for their aquatic habitats, often thriving in marine and estuarine environments. Their single-replicon structure may allow for efficient replication and regulation of essential genes, potentially aiding in their survival under fluctuating environmental conditions. The specific traits of Vibrio sp. V1B highlight its potential role in aquatic ecosystems. Given the ecological significance of Vibrio species in biogeochemical cycles, including nutrient recycling and interactions with other microorganisms, V1B may contribute to the microbial diversity and functionality within its habitat. Understanding the genomic characteristics of Vibrio sp. V1B could provide insights into its ecological roles and interactions in marine ecosystems. The study of such organisms is crucial for comprehending the dynamics of microbial communities and their contributions to ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. V1B
StrainV1B_115

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. V1B V1B_115
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. V1B V1B_115, whole genome shotgun sequence.

Gene Summary

Adenine Count

1612545 bp

Thymine Count

1604616 bp

Guanine Count

1312347 bp

Cytosine Count

1329464 bp

Genome Length

5858972 bp

Protein-coding Genes

5232 genes

Non-Coding Genes

40 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
prepilin peptidaseB6K85_02685Not AvailableNegative590492 - 59136132415.4
type ii secretion system protein fB6K85_02690Not AvailableNegative591433 - 59265645050.1
type iv-a pilus assembly atpase pilbB6K85_02695Not AvailableNegative592688 - 59437361972.5
type iv pilin subunit proteinB6K85_02700Not AvailableNegative594373 - 59483715915.8
carboxylating nicotinate-nucleotide diphosphorylaseB6K85_02705Not AvailableNegative595102 - 59598932117.4
1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampdB6K85_02710Not AvailablePositive596082 - 59663320726.6
pyruvate dehydrogenase complex transcriptional repressor pdhrB6K85_02715Not AvailablePositive597038 - 59780528928.6
pyruvate dehydrogenase (acetyl-transferring), homodimeric typeB6K85_02720Not AvailablePositive597861 - 60052499152.8
pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferaseB6K85_02725Not AvailablePositive600555 - 60247166064.9
dihydrolipoyl dehydrogenaseB6K85_02730Not AvailablePositive602715 - 60414550948.8

Displaying genes 531 – 540 of 5272 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.