Vibrio sp. V1B V1B_115

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. V1B, identified by the accession NRQQ00000000.1, is characterized by having a single replicon. This trait suggests a streamlined genomic organization, which can impact its metabolic capabilities and adaptability in various environments. Vibrio species are typically known for their aquatic habitats, often thriving in marine and estuarine environments. Their single-replicon structure may allow for efficient replication and regulation of essential genes, potentially aiding in their survival under fluctuating environmental conditions. The specific traits of Vibrio sp. V1B highlight its potential role in aquatic ecosystems. Given the ecological significance of Vibrio species in biogeochemical cycles, including nutrient recycling and interactions with other microorganisms, V1B may contribute to the microbial diversity and functionality within its habitat. Understanding the genomic characteristics of Vibrio sp. V1B could provide insights into its ecological roles and interactions in marine ecosystems. The study of such organisms is crucial for comprehending the dynamics of microbial communities and their contributions to ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. V1B
StrainV1B_115

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. V1B V1B_115
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. V1B V1B_115, whole genome shotgun sequence.

Gene Summary

Adenine Count

1612545 bp

Thymine Count

1604616 bp

Guanine Count

1312347 bp

Cytosine Count

1329464 bp

Genome Length

5858972 bp

Protein-coding Genes

5232 genes

Non-Coding Genes

40 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
escf/yscf/hrpa family type iii secretion system needle major subunitB6K85_01510Not AvailableNegative334348 - 3345969158.73
esce/ysce/ssae family type iii secretion system needle protein co-chaperoneB6K85_01515Not AvailableNegative334613 - 3348197675.22
escd/yscd/hrpq family type iii secretion system inner membrane ring proteinB6K85_01520Not AvailableNegative334806 - 33610748113.5
escc/yscc/hrcc family type iii secretion system outer membrane ring proteinB6K85_01525Not AvailableNegative336113 - 33798468782.0
yscb family type iii secretion system chaperoneB6K85_01530Not AvailableNegative337984 - 33841216244.4
type iii secretion negative regulator (lscz)B6K85_01535Not AvailableNegative338425 - 33940537977.1
arac family transcriptional regulatorB6K85_01540Not AvailableNegative339549 - 34040932952.3
type iii secretion system chaperone yscwB6K85_01545Not AvailableNegative341010 - 34141714762.8
exoenzyme s synthesis protein cB6K85_01550Not AvailablePositive341777 - 34222317153.5
hypothetical proteinB6K85_01555Not AvailablePositive342231 - 34253011079.0

Displaying genes 301 – 310 of 5272 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.