Vibrio sp. V1B V1B_115

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. V1B, identified by the accession NRQQ00000000.1, is characterized by having a single replicon. This trait suggests a streamlined genomic organization, which can impact its metabolic capabilities and adaptability in various environments. Vibrio species are typically known for their aquatic habitats, often thriving in marine and estuarine environments. Their single-replicon structure may allow for efficient replication and regulation of essential genes, potentially aiding in their survival under fluctuating environmental conditions. The specific traits of Vibrio sp. V1B highlight its potential role in aquatic ecosystems. Given the ecological significance of Vibrio species in biogeochemical cycles, including nutrient recycling and interactions with other microorganisms, V1B may contribute to the microbial diversity and functionality within its habitat. Understanding the genomic characteristics of Vibrio sp. V1B could provide insights into its ecological roles and interactions in marine ecosystems. The study of such organisms is crucial for comprehending the dynamics of microbial communities and their contributions to ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. V1B
StrainV1B_115

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. V1B V1B_115
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. V1B V1B_115, whole genome shotgun sequence.

Gene Summary

Adenine Count

1612545 bp

Thymine Count

1604616 bp

Guanine Count

1312347 bp

Cytosine Count

1329464 bp

Genome Length

5858972 bp

Protein-coding Genes

5232 genes

Non-Coding Genes

40 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tyea family type iii secretion system gatekeeper subunitB6K85_01410Not AvailableNegative318473 - 31875711090.1
hypothetical proteinB6K85_01415Not AvailableNegative318738 - 31963133135.0
escn/yscn/hrcn family type iii secretion system atpaseB6K85_01420Not AvailablePositive319818 - 32114047976.9
type iii secretion proteinB6K85_01425Not AvailablePositive321137 - 32159818459.9
type iii secretion system needle length determinantB6K85_01430Not AvailablePositive321608 - 32296049916.1
type iii secretion system proteinB6K85_01435Not AvailablePositive322960 - 32392535978.0
escr/yscr/hrcr family type iii secretion system export apparatus proteinB6K85_01440Not AvailablePositive323922 - 32457224236.4
escs/yscs/hrcs family type iii secretion system export apparatus proteinB6K85_01445Not AvailablePositive324586 - 3248529594.13
esct/ysct/hrct family type iii secretion system export apparatus proteinB6K85_01450Not AvailablePositive324849 - 32563129027.3
escu/yscu/hrcu family type iii secretion system export apparatus switch proteinB6K85_01455Not AvailablePositive325650 - 32669938669.9

Displaying genes 281 – 290 of 5272 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.