Aeromonas sobria strain TM18

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Aeromonadales

Family

Aeromonadaceae

Genus

Aeromonas

Description

Aeromonas sobria strain TM18 is a rod-shaped bacterium that exhibits the presence of flagella, which are important for its motility. This strain possesses a single replicon, indicating a streamlined genomic structure that may affect its replication and adaptation capabilities. In terms of ecological interactions, Aeromonas sobria strain TM18 has been identified in specific hosts, including Oncorhynchus mykiss (commonly known as rainbow trout) and Acipenser sturio (European sturgeon). The association with these aquatic species suggests that this bacterium may play a role in aquatic ecosystems, potentially influencing the health and microbiome of these fish populations. The accession number for Aeromonas sobria strain TM18 is NQMM00000000.1, which provides a reference for researchers looking to explore its genetic and phenotypic characteristics further. Understanding the traits of this strain can offer insights into its ecological role and potential impacts on fish health, given its host associations. Overall, Aeromonas sobria strain TM18 exemplifies the complex interactions between microorganisms and aquatic hosts, highlighting the importance of studying such relationships in microbiology and ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAeromonadales
FamilyAeromonadaceae
GenusAeromonas
SpeciesAeromonas sobria
Strainstrain TM18

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Oncorhynchus mykiss, Acipenser sturio
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aeromonas sobria strain TM18 scaffold_78, whole genome shotgun

Gene Summary

Adenine Count

990035 bp

Thymine Count

995305 bp

Guanine Count

1359877 bp

Cytosine Count

1350328 bp

Genome Length

4695545 bp

Protein-coding Genes

4148 genes

Non-Coding Genes

198 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorCJP16_01270Not AvailablePositive254963 - 25586833654.8
yicc family proteinCJP16_01275Not AvailableNegative255989 - 25685232871.8
ribonuclease phCJP16_01280Not AvailablePositive257000 - 25771625524.7
orotate phosphoribosyltransferaseCJP16_01285Not AvailablePositive257792 - 25844523878.7
copper-translocating p-type atpaseCJP16_01290Not AvailablePositive258637 - 26106684862.3
cu(i)-responsive transcriptional regulatorCJP16_01295Not AvailablePositive261067 - 26145614535.5
ggdef domain-containing proteinCJP16_01300Not AvailablePositive261623 - 26273841376.8
duf1040 domain-containing proteinCJP16_01305Not AvailablePositive262769 - 2630329945.2
cytochrome c oxidase accessory protein ccogCJP16_01310Not AvailablePositive263188 - 26463954879.6
stress response serine/threonine protein kinase yiheCJP16_01315Not AvailablePositive264744 - 26573338420.8

Displaying genes 321 – 330 of 4346 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.