Aeromonas sobria strain TM18

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Aeromonadales

Family

Aeromonadaceae

Genus

Aeromonas

Description

Aeromonas sobria strain TM18 is a rod-shaped bacterium that exhibits the presence of flagella, which are important for its motility. This strain possesses a single replicon, indicating a streamlined genomic structure that may affect its replication and adaptation capabilities. In terms of ecological interactions, Aeromonas sobria strain TM18 has been identified in specific hosts, including Oncorhynchus mykiss (commonly known as rainbow trout) and Acipenser sturio (European sturgeon). The association with these aquatic species suggests that this bacterium may play a role in aquatic ecosystems, potentially influencing the health and microbiome of these fish populations. The accession number for Aeromonas sobria strain TM18 is NQMM00000000.1, which provides a reference for researchers looking to explore its genetic and phenotypic characteristics further. Understanding the traits of this strain can offer insights into its ecological role and potential impacts on fish health, given its host associations. Overall, Aeromonas sobria strain TM18 exemplifies the complex interactions between microorganisms and aquatic hosts, highlighting the importance of studying such relationships in microbiology and ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAeromonadales
FamilyAeromonadaceae
GenusAeromonas
SpeciesAeromonas sobria
Strainstrain TM18

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Oncorhynchus mykiss, Acipenser sturio
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aeromonas sobria strain TM18 scaffold_78, whole genome shotgun

Gene Summary

Adenine Count

990035 bp

Thymine Count

995305 bp

Guanine Count

1359877 bp

Cytosine Count

1350328 bp

Genome Length

4695545 bp

Protein-coding Genes

4148 genes

Non-Coding Genes

198 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chitinaseCJP16_00680Not AvailableNegative132189 - 13438479205.1
oligopeptidase aCJP16_00685Not AvailablePositive134977 - 13701976417.7
diguanylate phosphodiesteraseCJP16_00690Not AvailablePositive137226 - 13977595809.1
16s rrna methyltransferaseCJP16_00695Not AvailablePositive139839 - 14059126939.1
modulator proteinCJP16_00700Not AvailableNegative140663 - 1409179594.32
guanosine-5'-triphosphate,3'-diphosphate pyrophosphataseCJP16_00705Not AvailableNegative140948 - 14243855166.6
atp-dependent rna helicase rhlbCJP16_00710Not AvailableNegative142452 - 14374448255.9
thioredoxin trxaCJP16_00715Not AvailablePositive143858 - 14418411766.2
transcription termination factor rhoCJP16_00720Not AvailablePositive144394 - 14565946955.8
hypothetical proteinCJP16_00725Not AvailablePositive145768 - 14676637175.1

Displaying genes 211 – 220 of 4346 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.