Pseudomonas fragi strain F1794

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fragi strain F1794 is a notable bacterium primarily found in cold environments, thriving in habitats such as cutting and processing laboratories, on the leaves of cold-adapted plants, and within meat and milk. This bacterium is often associated with processing facilities, where it can play a role in food safety and spoilage due to its psychrotrophic nature, allowing it to grow at low temperatures. The genetic characterization of Pseudomonas fragi strain F1794 reveals that it possesses a single replicon, which is indicative of its genomic structure and may influence its adaptability and survival in various environments. The genomic data for this strain is available under the accession number NQKR00000000.1, providing a resource for further studies into its genetic makeup and potential applications. Understanding the ecological role of Pseudomonas fragi strain F1794 is crucial, particularly in the context of food processing and preservation. Its ability to inhabit cold environments suggests that it may have significant implications for spoilage processes in refrigerated food products. This strain exemplifies the diverse adaptations of bacteria in cold habitats, highlighting its potential impact on food quality and safety in cold-chain management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fragi
Strainstrain F1794

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas fragi strain F1794
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas fragi strain F1794 Pseudomonas_fragi_F1794_Contig55,

Gene Summary

Adenine Count

1101610 bp

Thymine Count

1095054 bp

Guanine Count

1527797 bp

Cytosine Count

1531559 bp

Genome Length

5256020 bp

Protein-coding Genes

4639 genes

Non-Coding Genes

183 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
merr family transcriptional regulatorCJU80_18275Not AvailablePositive3962815 - 396322515719.8
hydroxymethylglutaryl-coa lyaseCJU80_18280Not AvailablePositive3963334 - 396423031211.5
amp-binding proteinCJU80_18285Not AvailableNegative3964903 - 396658561687.3
acyl-coa dehydrogenaseCJU80_18290Not AvailablePositive3966790 - 396795342372.6
methylcrotonoyl-coa carboxylaseCJU80_18295Not AvailablePositive3967965 - 396957257719.4
gamma-carboxygeranoyl-coa hydrataseCJU80_18300Not AvailablePositive3969600 - 397041830146.3
3-methylcrotonyl-coa carboxylaseCJU80_18305Not AvailablePositive3970415 - 397235569583.4
cro/cl family transcriptional regulatorCJU80_18310Not AvailableNegative3972416 - 397307524257.3
duf3077 domain-containing proteinCJU80_18315Not AvailablePositive3973205 - 397355212747.2
amino acid dehydrogenaseCJU80_18320Not AvailableNegative3973600 - 397465237498.8

Displaying genes 3641 – 3650 of 4822 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.