Pseudomonas fragi strain F1794

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fragi strain F1794 is a notable bacterium primarily found in cold environments, thriving in habitats such as cutting and processing laboratories, on the leaves of cold-adapted plants, and within meat and milk. This bacterium is often associated with processing facilities, where it can play a role in food safety and spoilage due to its psychrotrophic nature, allowing it to grow at low temperatures. The genetic characterization of Pseudomonas fragi strain F1794 reveals that it possesses a single replicon, which is indicative of its genomic structure and may influence its adaptability and survival in various environments. The genomic data for this strain is available under the accession number NQKR00000000.1, providing a resource for further studies into its genetic makeup and potential applications. Understanding the ecological role of Pseudomonas fragi strain F1794 is crucial, particularly in the context of food processing and preservation. Its ability to inhabit cold environments suggests that it may have significant implications for spoilage processes in refrigerated food products. This strain exemplifies the diverse adaptations of bacteria in cold habitats, highlighting its potential impact on food quality and safety in cold-chain management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fragi
Strainstrain F1794

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas fragi strain F1794
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas fragi strain F1794 Pseudomonas_fragi_F1794_Contig55,

Gene Summary

Adenine Count

1101610 bp

Thymine Count

1095054 bp

Guanine Count

1527797 bp

Cytosine Count

1531559 bp

Genome Length

5256020 bp

Protein-coding Genes

4639 genes

Non-Coding Genes

183 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleoside-diphosphate sugar epimeraseCJU80_15535Not AvailablePositive3364907 - 336554823197.3
ycek/yidq family lipoproteinCJU80_15540Not AvailableNegative3365565 - 33658529520.75
aromatic acid decarboxylaseCJU80_15545Not AvailableNegative3365845 - 336647422534.3
udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligaseCJU80_15550Not AvailableNegative3366471 - 336782048301.9
sigma-54-dependent fis family transcriptional regulatorCJU80_15555Not AvailableNegative3368010 - 336989069363.0
aldehyde dehydrogenaseCJU80_15560Not AvailablePositive3370237 - 337175754886.9
ethanolamine permeaseCJU80_15565Not AvailablePositive3371951 - 337339650665.9
ethanolamine ammonia lyase large subunitCJU80_15570Not AvailablePositive3373449 - 337484950370.3
ethanolamine ammonia-lyaseCJU80_15575Not AvailablePositive3374852 - 337564929005.7
hypothetical proteinCJU80_15580Not AvailablePositive3375862 - 337651524058.2

Displaying genes 3101 – 3110 of 4822 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.