Pseudomonas fragi strain F1794

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fragi strain F1794 is a notable bacterium primarily found in cold environments, thriving in habitats such as cutting and processing laboratories, on the leaves of cold-adapted plants, and within meat and milk. This bacterium is often associated with processing facilities, where it can play a role in food safety and spoilage due to its psychrotrophic nature, allowing it to grow at low temperatures. The genetic characterization of Pseudomonas fragi strain F1794 reveals that it possesses a single replicon, which is indicative of its genomic structure and may influence its adaptability and survival in various environments. The genomic data for this strain is available under the accession number NQKR00000000.1, providing a resource for further studies into its genetic makeup and potential applications. Understanding the ecological role of Pseudomonas fragi strain F1794 is crucial, particularly in the context of food processing and preservation. Its ability to inhabit cold environments suggests that it may have significant implications for spoilage processes in refrigerated food products. This strain exemplifies the diverse adaptations of bacteria in cold habitats, highlighting its potential impact on food quality and safety in cold-chain management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fragi
Strainstrain F1794

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas fragi strain F1794
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas fragi strain F1794 Pseudomonas_fragi_F1794_Contig55,

Gene Summary

Adenine Count

1101610 bp

Thymine Count

1095054 bp

Guanine Count

1527797 bp

Cytosine Count

1531559 bp

Genome Length

5256020 bp

Protein-coding Genes

4639 genes

Non-Coding Genes

183 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
benzoate 1,2-dioxygenase small subunitCJU80_09610Not AvailablePositive2113256 - 211374419194.5
nadh oxidaseCJU80_09615Not AvailablePositive2113814 - 211482436100.8
1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenaseCJU80_09620Not AvailablePositive2114845 - 211560627325.5
muconate cycloisomeraseCJU80_09625Not AvailablePositive2115634 - 211675240100.5
muconolactone delta-isomeraseCJU80_09630Not AvailablePositive2116880 - 211717011200.5
catechol 1,2-dioxygenaseCJU80_09635Not AvailablePositive2117213 - 211813934173.0
sugar abc transporter substrate-binding proteinCJU80_09640Not AvailablePositive2118334 - 211933835968.1
sugar abc transporterCJU80_09645Not AvailablePositive2119335 - 212087955683.0
abc transporter permeaseCJU80_09650Not AvailablePositive2120866 - 212186133881.5
branched-chain amino acid abc transporter permeaseCJU80_09655Not AvailablePositive2121858 - 212283533328.0

Displaying genes 2041 – 2050 of 4822 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.