Pseudomonas fragi strain F1794

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fragi strain F1794 is a notable bacterium primarily found in cold environments, thriving in habitats such as cutting and processing laboratories, on the leaves of cold-adapted plants, and within meat and milk. This bacterium is often associated with processing facilities, where it can play a role in food safety and spoilage due to its psychrotrophic nature, allowing it to grow at low temperatures. The genetic characterization of Pseudomonas fragi strain F1794 reveals that it possesses a single replicon, which is indicative of its genomic structure and may influence its adaptability and survival in various environments. The genomic data for this strain is available under the accession number NQKR00000000.1, providing a resource for further studies into its genetic makeup and potential applications. Understanding the ecological role of Pseudomonas fragi strain F1794 is crucial, particularly in the context of food processing and preservation. Its ability to inhabit cold environments suggests that it may have significant implications for spoilage processes in refrigerated food products. This strain exemplifies the diverse adaptations of bacteria in cold habitats, highlighting its potential impact on food quality and safety in cold-chain management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fragi
Strainstrain F1794

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas fragi strain F1794
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas fragi strain F1794 Pseudomonas_fragi_F1794_Contig55,

Gene Summary

Adenine Count

1101610 bp

Thymine Count

1095054 bp

Guanine Count

1527797 bp

Cytosine Count

1531559 bp

Genome Length

5256020 bp

Protein-coding Genes

4639 genes

Non-Coding Genes

183 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
siderophore-interacting proteinCJU80_08670Not AvailableNegative1912844 - 191384236021.7
rna polymerase subunit sigma-70CJU80_08675Not AvailableNegative1913932 - 191443819357.3
tetr family transcriptional regulatorCJU80_08680Not AvailableNegative1914542 - 191521926029.3
4-hydroxyphenylpyruvate dioxygenaseCJU80_08685Not AvailableNegative1915287 - 191719770291.3
mfs transporterCJU80_08690Not AvailablePositive1917442 - 191877048471.3
eama family transporterCJU80_08695Not AvailablePositive1918794 - 191967831652.7
protocatechuate 3,4-dioxygenase subunit alphaCJU80_08700Not AvailableNegative1919744 - 192034922318.2
protocatechuate 3,4-dioxygenase subunit betaCJU80_08705Not AvailableNegative1920361 - 192108026909.1
pca operon transcription factor pcaqCJU80_08710Not AvailableNegative1921179 - 192210833712.9
neutral zinc metallopeptidaseCJU80_08715Not AvailablePositive1922312 - 192320532127.1

Displaying genes 1861 – 1870 of 4822 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.