Pseudomonas fragi strain F1801

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fragi strain F1801 is a psychrophilic bacterium commonly found in cold environments, such as cutting and processing laboratories, on the leaves of cold-adapted plants, and in food products like meat and milk. This strain is particularly significant in processing facilities, where it can influence food safety and spoilage due to its ability to thrive at low temperatures. The genome of Pseudomonas fragi strain F1801 is characterized by a single replicon, which is indicative of its genetic structure and stability. The strain is cataloged under the accession number NQKQ00000000.1, which allows for its identification and further study within scientific databases. The ecological role of Pseudomonas fragi strain F1801 in cold environments is notable; it contributes to the microbial diversity in these habitats and is involved in the decomposition of organic matter. Its presence in food processing environments raises concerns regarding spoilage, as it can lead to deterioration of perishable goods. Understanding the traits and behaviors of this strain can inform better practices in food preservation and safety, highlighting the need for monitoring in settings where cold-adapted microorganisms are prevalent.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fragi
Strainstrain F1801

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas fragi strain F1801
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas fragi strain F1801 Pseudomonas_fragi_F1801_Contig80,

Gene Summary

Adenine Count

1048117 bp

Thymine Count

1071263 bp

Guanine Count

1488073 bp

Cytosine Count

1442953 bp

Genome Length

5051439 bp

Protein-coding Genes

4495 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
marr family transcriptional regulatorCJU81_15445Not AvailablePositive3369929 - 337040217606.8
multidrug rnd transporterCJU81_15450Not AvailablePositive3370399 - 337187452186.6
emra/emrk family multidrug efflux transporter periplasmic adaptor subunitCJU81_15455Not AvailablePositive3371884 - 337308943097.9
mfs transporterCJU81_15460Not AvailablePositive3373153 - 337468255324.9
udp-2,3-diacylglucosamine diphosphataseCJU81_15465Not AvailableNegative3374847 - 337557527693.7
peptidylprolyl isomeraseCJU81_15470Not AvailableNegative3375572 - 337607518305.7
glutamine--trna ligaseCJU81_15475Not AvailablePositive3376353 - 337805064557.1
cysteine--trna ligaseCJU81_15480Not AvailablePositive3378073 - 337945551667.6
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolaseCJU81_15485Not AvailableNegative3379573 - 338042730504.0
Trna-argNot AvailableNot AvailablePositive3380708 - 3380784Not Available

Displaying genes 3071 – 3080 of 4626 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.