Pseudomonas fragi strain F1801

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fragi strain F1801 is a psychrophilic bacterium commonly found in cold environments, such as cutting and processing laboratories, on the leaves of cold-adapted plants, and in food products like meat and milk. This strain is particularly significant in processing facilities, where it can influence food safety and spoilage due to its ability to thrive at low temperatures. The genome of Pseudomonas fragi strain F1801 is characterized by a single replicon, which is indicative of its genetic structure and stability. The strain is cataloged under the accession number NQKQ00000000.1, which allows for its identification and further study within scientific databases. The ecological role of Pseudomonas fragi strain F1801 in cold environments is notable; it contributes to the microbial diversity in these habitats and is involved in the decomposition of organic matter. Its presence in food processing environments raises concerns regarding spoilage, as it can lead to deterioration of perishable goods. Understanding the traits and behaviors of this strain can inform better practices in food preservation and safety, highlighting the need for monitoring in settings where cold-adapted microorganisms are prevalent.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fragi
Strainstrain F1801

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas fragi strain F1801
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas fragi strain F1801 Pseudomonas_fragi_F1801_Contig80,

Gene Summary

Adenine Count

1048117 bp

Thymine Count

1071263 bp

Guanine Count

1488073 bp

Cytosine Count

1442953 bp

Genome Length

5051439 bp

Protein-coding Genes

4495 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sarcosine oxidase subunit gammaCJU81_07890Not AvailablePositive1722691 - 172332322800.3
formyltetrahydrofolate deformylaseCJU81_07895Not AvailablePositive1723480 - 172433732167.5
formaldehyde dehydrogenase, glutathione-independentCJU81_07900Not AvailablePositive1724404 - 172560342148.8
anti-sigma factorCJU81_07905Not AvailableNegative1725702 - 172637624646.2
rna polymerase subunit sigmaCJU81_07910Not AvailableNegative1726373 - 172687018769.5
hypothetical proteinCJU81_07915Not AvailablePositive1727188 - 172774518512.2
acyltransferaseCJU81_07920Not AvailableNegative1727749 - 172863633954.6
atp-dependent zinc proteaseCJU81_07925Not AvailablePositive1728859 - 172935918413.1
monofunctional biosynthetic peptidoglycan transglycosylaseCJU81_07930Not AvailableNegative1729501 - 173022327189.5
hypothetical proteinCJU81_07935Not AvailablePositive1730302 - 173067313048.5

Displaying genes 1601 – 1610 of 4626 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.