Pseudomonas fragi strain F1801

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fragi strain F1801 is a psychrophilic bacterium commonly found in cold environments, such as cutting and processing laboratories, on the leaves of cold-adapted plants, and in food products like meat and milk. This strain is particularly significant in processing facilities, where it can influence food safety and spoilage due to its ability to thrive at low temperatures. The genome of Pseudomonas fragi strain F1801 is characterized by a single replicon, which is indicative of its genetic structure and stability. The strain is cataloged under the accession number NQKQ00000000.1, which allows for its identification and further study within scientific databases. The ecological role of Pseudomonas fragi strain F1801 in cold environments is notable; it contributes to the microbial diversity in these habitats and is involved in the decomposition of organic matter. Its presence in food processing environments raises concerns regarding spoilage, as it can lead to deterioration of perishable goods. Understanding the traits and behaviors of this strain can inform better practices in food preservation and safety, highlighting the need for monitoring in settings where cold-adapted microorganisms are prevalent.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fragi
Strainstrain F1801

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas fragi strain F1801
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas fragi strain F1801 Pseudomonas_fragi_F1801_Contig80,

Gene Summary

Adenine Count

1048117 bp

Thymine Count

1071263 bp

Guanine Count

1488073 bp

Cytosine Count

1442953 bp

Genome Length

5051439 bp

Protein-coding Genes

4495 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
escu/yscu/hrcu family type iii secretion system export apparatus switch proteinCJU81_05265Not AvailablePositive1182700 - 118380040526.2
avre family type 3 secretion system effectorCJU81_05270Not AvailablePositive1183958 - 1188175153751.0
type iii secretion proteinCJU81_05275Not AvailableNegative1188308 - 11885117330.98
escc/yscc/hrcc family type iii secretion system outer membrane ring proteinCJU81_05280Not AvailableNegative1188508 - 119053274422.0
type iii secretion protein hrpfCJU81_05285Not AvailableNegative1190529 - 11907478229.75
type iii secretion proteinCJU81_05295Not AvailableNegative1191360 - 119190520617.8
escj/yscj/hrcj family type iii secretion inner membrane ring proteinCJU81_05300Not AvailableNegative1191902 - 119265727479.6
hypothetical proteinCJU81_05305Not AvailableNegative1192666 - 119303413172.0
hypothetical proteinCJU81_05310Not AvailableNegative1193132 - 11933598301.02
hypothetical proteinCJU81_05315Not AvailableNegative1193392 - 11935987065.7

Displaying genes 1081 – 1090 of 4626 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.