Pseudomonas fragi strain F1815

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fragi strain F1815 is a psychrotolerant bacterium predominantly found in environments associated with cold temperatures. Its habitat includes cutting and processing laboratories, leaves of cold-adapted plants, meat, milk, and various processing facilities. This strain demonstrates a significant adaptability to low-temperature conditions, making it relevant in food microbiology, particularly in relation to food spoilage and preservation. The strain is characterized by having a single replicon, which can indicate a streamlined genomic structure. Its genomic data is cataloged under the accession number NQKO00000000.1, providing a reference point for further studies on its genetic makeup and potential applications. Given its prevalence in food-related environments, Pseudomonas fragi strain F1815 plays a crucial role in the microbiome associated with cold storage and processing facilities. Its presence in meat and milk suggests a potential impact on food safety and quality. Understanding its behavior and interactions within these habitats can inform better management practices in food processing to mitigate spoilage and enhance preservation methods. The ecological insight is that Pseudomonas fragi strain F1815 exemplifies how psychrotolerant microorganisms can thrive in specific niches, influencing the microbiological landscape of cold environments and food products.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fragi
Strainstrain F1815

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas fragi strain F1815
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas fragi strain F1815


Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4441 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nickel abc transporter permease subunit nikbCJU76_00260Not AvailableNegative51649 - 5259035061.1
nickel abc transporter, nickel/metallophore periplasmic binding proteinCJU76_00265Not AvailableNegative52594 - 5416857385.4
nickel-responsive transcriptional regulator nikrCJU76_00270Not AvailablePositive54259 - 5466614894.7
tonb-dependent siderophore receptorCJU76_00275Not AvailableNegative54712 - 5712388378.0
transcriptional regulatorCJU76_00280Not AvailableNegative57235 - 5820635105.1
rna polymerase subunit sigmaCJU76_00285Not AvailableNegative58203 - 5871519146.4
5s ribosomal rnaNot AvailableNot AvailablePositive59264 - 59379Not Available
alanine racemaseCJU76_00290Not AvailableNegative58905 - 6013443957.8
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive60623 - 60719Not Available
transporterCJU76_00295Not AvailableNegative60263 - 6070315655.5

Displaying genes 121 – 130 of 4574 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.