Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial biogenesis outer membrane usher protein | CI641_003480 | Not Available | Negative | 701928 - 704408 | 92417.2 |
| fimbrial assembly protein | CI641_003485 | Not Available | Negative | 704424 - 705098 | 24778.2 |
| type 1 fimbrial protein | CI641_003490 | Not Available | Negative | 705178 - 705720 | 19075.6 |
| duf2574 family protein | CI641_003495 | Not Available | Negative | 706013 - 706294 | 10137.2 |
| iron-sulfur cluster carrier protein apbc | CI641_003500 | Not Available | Negative | 706557 - 707666 | 39940.4 |
| methionine--trna ligase | CI641_003505 | Not Available | Positive | 707798 - 709831 | 76200.8 |
| duf4132 domain-containing protein | CI641_003510 | Not Available | Positive | 709972 - 713769 | 143326.0 |
| duf4132 domain-containing protein | CI641_003515 | Not Available | Positive | 713782 - 717531 | 139964.0 |
| duf4132 domain-containing protein | CI641_003520 | Not Available | Positive | 717541 - 721173 | 138252.0 |
| hypothetical protein | CI641_003525 | Not Available | Positive | 721234 - 721587 | 13956.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





