Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-ribosylglycohydrolase family protein | CI641_003430 | Not Available | Positive | 693595 - 694599 | 35610.4 |
| sugar kinase | CI641_003435 | Not Available | Positive | 694596 - 695561 | 34380.4 |
| gntr family transcriptional regulator | CI641_003440 | Not Available | Negative | 695535 - 696281 | 28278.8 |
| glycosyl hydrolase 25 family protein | CI641_003445 | Not Available | Negative | 696333 - 697151 | 31623.9 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | CI641_003450 | Not Available | Negative | 697216 - 698016 | 28635.2 |
| hydroxyethylthiazole kinase | CI641_003455 | Not Available | Negative | 698013 - 698801 | 27356.7 |
| ni(ii)/co(ii)-binding transcriptional repressor rcnr | CI641_003460 | Not Available | Negative | 699024 - 699296 | 10134.5 |
| nickel/cobalt efflux protein rcna | CI641_003465 | Not Available | Positive | 699417 - 700241 | 30391.2 |
| ni(ii)/co(ii) efflux transporter accessory subunit rcnb | CI641_003470 | Not Available | Positive | 700460 - 700798 | 12466.8 |
| putative fimbrial-like adhesin protein | CI641_003475 | Not Available | Negative | 700880 - 701914 | 36891.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





