Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | CI641_003280 | Not Available | Positive | 659116 - 662433 | 123957.0 |
| dna-3-methyladenine glycosylase 2 | CI641_003285 | Not Available | Negative | 662472 - 663329 | 31646.4 |
| molecular chaperone | CI641_003290 | Not Available | Positive | 663463 - 664815 | 49286.1 |
| protein kinase yegi | CI641_003295 | Not Available | Negative | 664827 - 666767 | 71402.5 |
| protein phosphatase 2c domain-containing protein | CI641_003300 | Not Available | Negative | 666764 - 667525 | 27364.0 |
| vwa domain-containing protein | CI641_003305 | Not Available | Negative | 667522 - 668181 | 24191.9 |
| type i toxin-antitoxin system toxin ibsa | CI641_003310 | Not Available | Negative | 668402 - 668461 | 2232.03 |
| type i toxin-antitoxin system ibs family toxin | CI641_003315 | Not Available | Negative | 668734 - 668790 | 2063.86 |
| type i toxin-antitoxin system ibs family toxin | CI641_003320 | Not Available | Negative | 669062 - 669118 | 2102.89 |
| multidrug efflux rnd transporter subunit mdta | CI641_003325 | Not Available | Positive | 669397 - 670644 | 44484.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





