Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hisf | CI641_003030 | Not Available | Positive | 599706 - 600482 | 28428.0 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | CI641_003035 | Not Available | Positive | 600476 - 601084 | 22597.9 |
| glycosyltransferase | CI641_003040 | Not Available | Negative | 601123 - 602238 | 42559.0 |
| glycosyltransferase family 4 protein | CI641_003045 | Not Available | Negative | 602248 - 603393 | 43870.9 |
| glycosyltransferase | CI641_003050 | Not Available | Negative | 603457 - 607098 | 135668.0 |
| methyltransferase domain-containing protein | CI641_003055 | Not Available | Negative | 607101 - 608378 | 48719.1 |
| o8 family o-antigen abc transporter atp-binding protein wzt | CI641_003060 | Not Available | Negative | 608378 - 609592 | 45050.9 |
| o8 family o-antigen abc transporter permease subunit wzm | CI641_003065 | Not Available | Negative | 609592 - 610386 | 30293.2 |
| phosphomannomutase cpsg | CI641_003070 | Not Available | Negative | 610388 - 611764 | 50860.5 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | CI641_003075 | Not Available | Negative | 611788 - 613203 | 52816.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





