Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CI641_002780 | Not Available | Negative | 559006 - 559302 | 11336.9 |
| hypothetical protein | CI641_002785 | Not Available | Negative | 559347 - 559637 | 12031.4 |
| alpa family transcriptional regulator | CI641_002790 | Not Available | Negative | 559719 - 559937 | 8296.14 |
| hypothetical protein | CI641_002795 | Not Available | Negative | 560088 - 560963 | 34164.0 |
| l,d-transpeptidase | CI641_002800 | Not Available | Negative | 561398 - 562333 | 34507.2 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | CI641_002805 | Not Available | Negative | 562395 - 563474 | 36951.3 |
| adenosylcobinamide-gdp ribazoletransferase | CI641_002810 | Not Available | Negative | 563486 - 564229 | 26397.4 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | CI641_002815 | Not Available | Negative | 564226 - 564771 | 20102.1 |
| cobalamin biosynthesis protein | CI641_002820 | Not Available | Negative | 564905 - 565342 | 15621.6 |
| regulatory protein pocr | CI641_002825 | Not Available | Negative | 565824 - 566738 | 34656.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





