Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | CI641_002675 | Not Available | Negative | 541278 - 542741 | 51309.6 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | CI641_002680 | Not Available | Negative | 542794 - 543351 | 18770.6 |
| conjugal transfer protein trad | CI641_002685 | Not Available | Negative | 543745 - 544050 | 11518.3 |
| conjugal transfer protein | CI641_002690 | Not Available | Positive | 544695 - 546212 | 57519.9 |
| duf3800 domain-containing protein | CI641_002695 | Not Available | Positive | 546342 - 547541 | 45801.5 |
| hypothetical protein | CI641_002700 | Not Available | Negative | 547652 - 548395 | 29286.1 |
| hypothetical protein | CI641_002705 | Not Available | Negative | 548621 - 548896 | 9823.21 |
| hypothetical protein | CI641_002710 | Not Available | Negative | 548907 - 549437 | 19051.7 |
| duf4755 domain-containing protein | CI641_002715 | Not Available | Positive | 549872 - 550345 | 18120.9 |
| hypothetical protein | CI641_002720 | Not Available | Positive | 550377 - 550754 | 13961.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





