Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative positive regulator of late gene transcription | CI641_020525 | Not Available | Positive | 4267093 - 4267311 | 8421.13 |
| Attr | Not Available | Not Available | Positive | 4267426 - 4267438 | Not Available |
| Pyruvate formate-lyase | CI641_020530 | Not Available | Negative | 4267632 - 4269914 | 85376.1 |
| Transposase is26 | CI641_023125 | Not Available | Positive | 4794140 - 4794844 | 27896.9 |
| Hypothetical protein | CI641_023130 | Not Available | Positive | 4794899 - 4795186 | 11391.1 |
| Extended-spectrum beta-lactamase ctx-m-27 | CI641_023135 | Not Available | Positive | 4795442 - 4796317 | 31173.4 |
| cupin fold metalloprotein, wbuc family | CI641_023140 | Not Available | Negative | 4796364 - 4796696 | 12100.3 |
| Transposase | CI641_023145 | Not Available | Positive | 4796710 - 4799505 | 105134.0 |
| Isrso10-transposase orfa protein | CI641_023150 | Not Available | Negative | 4799548 - 4800563 | 35953.8 |
| Hypothetical protein | CI641_023155 | Not Available | Positive | 4800958 - 4801614 | 24740.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





