Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yebc/pmpr family dna-binding transcriptional regulator | CI641_002625 | Not Available | Positive | 531211 - 531927 | 25854.5 |
| Trna-asn | Not Available | Not Available | Positive | 532380 - 532455 | Not Available |
| toxic metabolite efflux mate transporter yeeo | CI641_002635 | Not Available | Negative | 532556 - 534199 | 60050.1 |
| Trna-asn | Not Available | Not Available | Positive | 534204 - 534279 | Not Available |
| hth-type transcriptional regulator cbl | CI641_002645 | Not Available | Negative | 534317 - 535267 | 35891.1 |
| nitrogen assimilation transcriptional regulator | CI641_002650 | Not Available | Negative | 535369 - 536286 | 32837.1 |
| Trna-asn | Not Available | Not Available | Positive | 536613 - 536688 | Not Available |
| duf4102 domain-containing protein | CI641_002660 | Not Available | Positive | 536868 - 538142 | 48866.8 |
| hypothetical protein | CI641_002665 | Not Available | Positive | 538278 - 539870 | 63444.7 |
| hypothetical protein | CI641_002670 | Not Available | Positive | 539910 - 541010 | 42882.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





