Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar motor switch protein flin | CI641_002415 | Not Available | Positive | 488948 - 489361 | 14811.7 |
| flagellar type iii secretion system protein flio | CI641_002420 | Not Available | Positive | 489364 - 489729 | 12700.7 |
| flagellar type iii secretion system pore protein flip | CI641_002425 | Not Available | Positive | 489729 - 490466 | 26916.1 |
| flagellar biosynthesis protein fliq | CI641_002430 | Not Available | Positive | 490476 - 490745 | 9632.54 |
| flagellar type iii secretion system protein flir | CI641_002435 | Not Available | Positive | 490754 - 491539 | 28539.4 |
| transcriptional regulator rcsa | CI641_002440 | Not Available | Positive | 491829 - 492452 | 23522.8 |
| protein dsrb | CI641_002445 | Not Available | Negative | 492496 - 492738 | 9071.8 |
| hypothetical protein | CI641_002450 | Not Available | Negative | 492671 - 492859 | 7014.32 |
| peroxide/acid resistance protein yodd | CI641_002455 | Not Available | Positive | 492847 - 493074 | 8579.66 |
| mannosyl-3-phosphoglycerate phosphatase-related protein | CI641_002460 | Not Available | Positive | 493372 - 494187 | 30328.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





