Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphogluconate dehydratase | CI641_001960 | Not Available | Negative | 402981 - 404792 | 64642.9 |
| glucose-6-phosphate dehydrogenase | CI641_001965 | Not Available | Negative | 405027 - 406502 | 55707.5 |
| murr/rpir family transcriptional regulator | CI641_001970 | Not Available | Positive | 406840 - 407709 | 31977.4 |
| pyruvate kinase ii | CI641_001975 | Not Available | Positive | 407837 - 409279 | 51360.3 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | CI641_001980 | Not Available | Negative | 409410 - 410381 | 37412.5 |
| murein dd-endopeptidase mepm | CI641_001985 | Not Available | Negative | 410501 - 411823 | 49060.6 |
| zinc abc transporter substrate-binding protein znua | CI641_001990 | Not Available | Negative | 411839 - 412771 | 33851.3 |
| zinc abc transporter atp-binding protein znuc | CI641_001995 | Not Available | Positive | 412850 - 413605 | 27869.3 |
| zinc abc transporter permease subunit znub | CI641_002000 | Not Available | Positive | 413602 - 414387 | 27778.5 |
| holliday junction branch migration dna helicase ruvb | CI641_002005 | Not Available | Negative | 414534 - 415544 | 37176.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





