Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease d | CI641_001720 | Not Available | Negative | 357052 - 358167 | 42214.0 |
| long-chain-fatty-acid--coa ligase fadd | CI641_001725 | Not Available | Negative | 358249 - 359934 | 62335.7 |
| slp family lipoprotein yeay | CI641_001730 | Not Available | Negative | 360139 - 360720 | 20949.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | CI641_001735 | Not Available | Negative | 360760 - 361455 | 25164.2 |
| atp-dependent dna helicase | CI641_001740 | Not Available | Negative | 361513 - 363423 | 70365.9 |
| rida family protein | CI641_001745 | Not Available | Positive | 363555 - 363899 | 12493.9 |
| duf1889 family protein | CI641_001750 | Not Available | Positive | 364262 - 364621 | 13232.0 |
| yoah family protein | CI641_001755 | Not Available | Negative | 364741 - 364920 | 6554.7 |
| aminodeoxychorismate synthase component 1 | CI641_001760 | Not Available | Positive | 364994 - 366355 | 51016.3 |
| coa pyrophosphatase | CI641_001765 | Not Available | Positive | 366359 - 366937 | 21464.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





