Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yoak family small membrane protein | CI641_001665 | Not Available | Positive | 348737 - 348835 | 3458.45 |
| protein yoaj | CI641_001670 | Not Available | Positive | 348838 - 348912 | 2691.57 |
| glsb/yeaq/ymge family stress response membrane protein | CI641_001675 | Not Available | Negative | 348971 - 349219 | 8671.14 |
| duf1869 domain-containing protein | CI641_001680 | Not Available | Negative | 349367 - 349549 | 6608.63 |
| duf1971 domain-containing protein | CI641_001685 | Not Available | Negative | 349553 - 349912 | 13612.2 |
| leucine efflux protein leue | CI641_001690 | Not Available | Negative | 350085 - 350723 | 23232.0 |
| lysr family transcriptional regulator | CI641_001695 | Not Available | Negative | 350850 - 351773 | 34646.8 |
| multifunctional d-malate/3-isopropylmalate/tartarate dehydrogenase | CI641_001700 | Not Available | Positive | 351876 - 352961 | 40317.2 |
| carnitine monooxygenase subunit yeaw | CI641_001710 | Not Available | Positive | 354853 - 355977 | 42563.0 |
| carnitine monooxygenase subunit yeax | CI641_001715 | Not Available | Positive | 356033 - 356998 | 35706.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





