Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | CI641_001615 | Not Available | Positive | 340349 - 341824 | 56012.5 |
| ggdef domain-containing protein | CI641_001620 | Not Available | Positive | 342005 - 343495 | 56589.8 |
| mischarged aminoacyl-trna deacylase | CI641_001625 | Not Available | Positive | 343538 - 344041 | 17850.7 |
| hypothetical protein | CI641_001630 | Not Available | Negative | 344042 - 344146 | 3771.77 |
| duf441 domain-containing protein | CI641_001635 | Not Available | Positive | 344316 - 344762 | 15256.6 |
| helix-turn-helix transcriptional regulator | CI641_001640 | Not Available | Negative | 344719 - 345540 | 30471.3 |
| 2-nitroimidazole transporter | CI641_001645 | Not Available | Positive | 345637 - 346818 | 41210.8 |
| duf488 domain-containing protein | CI641_001650 | Not Available | Positive | 346873 - 347220 | 13400.9 |
| duf333 domain-containing lipoprotein yoaf | CI641_001655 | Not Available | Negative | 347242 - 347496 | 8942.87 |
| diguanylate cyclase dgcp | CI641_001660 | Not Available | Positive | 347679 - 348704 | 38547.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





