Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-independent periplasmic protein-refolding chaperone | CI641_001410 | Not Available | Negative | 295821 - 296306 | 18172.1 |
| succinylglutamate desuccinylase | CI641_001415 | Not Available | Negative | 296636 - 297604 | 35787.3 |
| n-succinylarginine dihydrolase | CI641_001420 | Not Available | Negative | 297597 - 298940 | 49254.3 |
| succinylglutamate-semialdehyde dehydrogenase | CI641_001425 | Not Available | Negative | 298937 - 300415 | 53104.5 |
| arginine n-succinyltransferase | CI641_001430 | Not Available | Negative | 300412 - 301446 | 38488.0 |
| succinylornithine/acetylornithine transaminase | CI641_001435 | Not Available | Negative | 301443 - 302663 | 43667.8 |
| exodeoxyribonuclease iii | CI641_001440 | Not Available | Positive | 303109 - 303915 | 30970.9 |
| tvp38/tmem64 family protein | CI641_001445 | Not Available | Positive | 304072 - 304776 | 25980.5 |
| tvp38/tmem64 family protein | CI641_001450 | Not Available | Positive | 304773 - 305477 | 26045.5 |
| carboxymuconolactone decarboxylase family protein | CI641_001455 | Not Available | Positive | 305477 - 306025 | 20595.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





