Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer pilus acetylase trax | CI641_RS00370 | Not Available | Positive | 54884 - 55630 | 27584.8 |
| fertility inhibition protein fino | CI641_RS00375 | Not Available | Positive | 55685 - 56245 | 21162.7 |
| winged helix-turn-helix domain-containing protein | CI641_RS28140 | Not Available | Positive | 56376 - 56589 | 7138.58 |
| pin domain-containing protein | CI641_RS00385 | Not Available | Positive | 56875 - 57552 | 24809.6 |
| winged helix-turn-helix domain-containing protein | CI641_RS00390 | Not Available | Positive | 58206 - 58418 | 7888.31 |
| thermonuclease family protein | CI641_RS00400 | Not Available | Positive | 58662 - 59123 | 17872.6 |
| hemolysin expression modulator hha | CI641_RS00405 | Not Available | Positive | 59169 - 59378 | 8253.88 |
| is3 family transposase | CI641_RS00410 | Not Available | Positive | 59525 - 60753 | 46369.6 |
| duf2726 domain-containing protein | CI641_RS00415 | Not Available | Positive | 60764 - 61342 | 22448.6 |
| replication regulatory protein repa | CI641_RS00420 | Not Available | Positive | 61582 - 61836 | 9438.51 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





