Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv conjugative transfer system protein tral | CI641_RS00220 | Not Available | Positive | 25684 - 25995 | 11904.7 |
| type iv conjugative transfer system protein trae | CI641_RS00225 | Not Available | Positive | 26017 - 26583 | 21225.5 |
| type-f conjugative transfer system secretin trak | CI641_RS00230 | Not Available | Positive | 26570 - 27298 | 25628.6 |
| f-type conjugal transfer pilus assembly protein trab | CI641_RS00235 | Not Available | Positive | 27298 - 28725 | 50462.8 |
| conjugal transfer pilus-stabilizing protein trap | CI641_RS00240 | Not Available | Positive | 28715 - 29305 | 22020.7 |
| conjugal transfer protein trbd | CI641_RS00245 | Not Available | Positive | 29292 - 29609 | 11242.9 |
| conjugal transfer protein trbg | CI641_RS00250 | Not Available | Positive | 29606 - 29857 | 9126.86 |
| type iv conjugative transfer system lipoprotein trav | CI641_RS00255 | Not Available | Positive | 29854 - 30369 | 18467.2 |
| conjugal transfer protein trar | CI641_RS00260 | Not Available | Positive | 30504 - 30725 | 8342.01 |
| hypothetical protein | CI641_RS00265 | Not Available | Positive | 30718 - 31194 | 18229.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





