Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CI641_RS28130 | Not Available | Positive | 20546 - 20776 | 7962.73 |
| winged helix-turn-helix domain-containing protein | CI641_RS28135 | Not Available | Negative | 20774 - 20947 | 6292.58 |
| hypothetical protein | CI641_RS00180 | Not Available | Positive | 21017 - 21223 | 7382.98 |
| hypothetical protein | CI641_RS00185 | Not Available | Positive | 21248 - 21535 | 11035.3 |
| duf932 domain-containing protein | CI641_RS00190 | Not Available | Positive | 21653 - 22474 | 31605.7 |
| transglycosylase slt domain-containing protein | CI641_RS00195 | Not Available | Negative | 22771 - 23418 | 24549.9 |
| conjugal transfer relaxosome dna-binding protein tram | CI641_RS00200 | Not Available | Positive | 23695 - 24078 | 14543.4 |
| pas domain-containing protein | CI641_RS00205 | Not Available | Positive | 24269 - 24955 | 26505.8 |
| conjugal transfer relaxosome protein tray | CI641_RS00210 | Not Available | Positive | 25049 - 25276 | 9005.61 |
| type iv conjugative transfer system pilin traa | CI641_RS00215 | Not Available | Positive | 25310 - 25669 | 12667.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





