Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CI641_RS00005 | Not Available | Positive | 36 - 920 | 33695.7 |
| winged helix-turn-helix domain-containing protein | CI641_RS00010 | Not Available | Positive | 916 - 1085 | 6537.87 |
| hypothetical protein | CI641_RS27690 | Not Available | Negative | 1092 - 1259 | 6494.07 |
| anti-phage protein ppl | CI641_RS00020 | Not Available | Negative | 1431 - 4106 | 99701.4 |
| duf4238 domain-containing protein | CI641_RS00025 | Not Available | Positive | 4409 - 5410 | 38331.1 |
| hypothetical protein | CI641_RS00030 | Not Available | Negative | 5635 - 6045 | 15359.5 |
| plasmid partitioning/stability family protein | CI641_RS00035 | Not Available | Negative | 6206 - 6556 | 13178.8 |
| plasmid segregation protein parm | CI641_RS00040 | Not Available | Negative | 6559 - 7521 | 35794.5 |
| hypothetical protein | CI641_RS00045 | Not Available | Positive | 7653 - 7961 | 11718.2 |
| dna methylase | CI641_RS00055 | Not Available | Positive | 8038 - 8721 | 25432.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





