Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | CI641_027590 | Not Available | Negative | 5479674 - 5480292 | 20991.8 |
| dna primase | CI641_027595 | Not Available | Negative | 5480293 - 5480872 | 19723.4 |
| is91-like element isvsa3 family transposase | CI641_027600 | Not Available | Negative | 5480873 - 5481417 | 20367.9 |
| chromosome partitioning protein parb | CI641_027605 | Not Available | Negative | 5481418 - 5481850 | 16016.4 |
| incfii family plasmid replication initiator repa | CI641_027610 | Not Available | Positive | 5481851 - 5482259 | 15114.3 |
| type iv secretion protein rhs | CI641_027615 | Not Available | Negative | 5482260 - 5482660 | 15324.7 |
| single-stranded dna-binding protein | CI641_027620 | Not Available | Positive | 5482682 - 5483032 | 13060.8 |
| is1-like element is1b family transposase | CI641_027625 | Not Available | Positive | 5483033 - 5483379 | 13567.6 |
| fimbrial biogenesis outer membrane usher protein | CI641_027630 | Not Available | Positive | 5483380 - 5483721 | 13475.3 |
| class i sam-dependent methyltransferase | CI641_027635 | Not Available | Positive | 5483722 - 5483829 | 4148.05 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





