Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shufflon protein c | CI641_027440 | Not Available | Negative | 5465882 - 5466187 | 11344.2 |
| shufflon protein d' | CI641_027445 | Not Available | Negative | 5466175 - 5466393 | 7988.18 |
| pilus assembly protein pilv | CI641_027450 | Not Available | Positive | 5466360 - 5466460 | 3917.59 |
| dna primase | CI641_027455 | Not Available | Negative | 5466573 - 5467553 | 36464.6 |
| conjugal transfer protein trar | CI641_027460 | Not Available | Negative | 5467831 - 5468052 | 8313.95 |
| type iv conjugative transfer system lipoprotein trav | CI641_027465 | Not Available | Negative | 5468187 - 5468702 | 18433.2 |
| conjugal transfer protein trbg | CI641_027470 | Not Available | Negative | 5468699 - 5468849 | 5478.38 |
| sulfonamide-resistant dihydropteroate synthase sul2 | CI641_027475 | Not Available | Positive | 5468868 - 5469683 | 28471.1 |
| phosphoglucosamine mutase | CI641_027480 | Not Available | Positive | 5469770 - 5470012 | 8820.85 |
| type i addiction module toxin, syme family | CI641_027485 | Not Available | Positive | 5470013 - 5470235 | 8166.86 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





