Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trau | CI641_027380 | Not Available | Positive | 5456173 - 5457163 | 36667.4 |
| hypothetical protein | CI641_027385 | Not Available | Positive | 5457283 - 5457471 | 6943.65 |
| is91 family transposase | CI641_027390 | Not Available | Positive | 5457481 - 5458680 | 45524.7 |
| type iv secretion system protein trac | CI641_027395 | Not Available | Positive | 5458852 - 5460502 | 62133.4 |
| type i toxin-antitoxin system hok family toxin | CI641_027400 | Not Available | Negative | 5460774 - 5460932 | 6082.66 |
| plasmid sos inhibition protein a | CI641_027405 | Not Available | Negative | 5461212 - 5461931 | 27743.0 |
| conjugation system sos inhibitor psib | CI641_027410 | Not Available | Negative | 5461928 - 5462107 | 6187.44 |
| tn3-like element tnas1 family transposase | CI641_027415 | Not Available | Negative | 5462141 - 5463662 | 57044.1 |
| shufflon protein b | CI641_027430 | Not Available | Positive | 5465136 - 5465385 | 8648.03 |
| shufflon protein c' | CI641_027435 | Not Available | Positive | 5465730 - 5465885 | 5595.65 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





