Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mph(a) family macrolide 2'-phosphotransferase | CI641_027265 | Not Available | Negative | 5439693 - 5440598 | 33229.7 |
| marr family transcriptional regulator | CI641_027270 | Not Available | Positive | 5441031 - 5441465 | 15946.4 |
| plasmid recombination enzyme | CI641_027275 | Not Available | Negative | 5441527 - 5442543 | 38530.7 |
| helix-turn-helix domain-containing protein | CI641_027280 | Not Available | Positive | 5443075 - 5443578 | 18937.5 |
| hypothetical protein | CI641_027295 | Not Available | Negative | 5445188 - 5445721 | 19788.8 |
| mobilization protein | CI641_027300 | Not Available | Negative | 5445724 - 5446650 | 36402.5 |
| hypothetical protein | CI641_027305 | Not Available | Positive | 5446826 - 5447221 | 15257.5 |
| pas domain s-box protein | CI641_027310 | Not Available | Positive | 5447232 - 5448737 | 53877.6 |
| hypothetical protein | CI641_027315 | Not Available | Negative | 5448885 - 5449124 | 9056.79 |
| replication protein repa4 | CI641_027320 | Not Available | Positive | 5449334 - 5449465 | 4778.83 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





