Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobilization protein | CI641_027205 | Not Available | Negative | 5427636 - 5428154 | 19445.5 |
| duf1795 domain-containing protein | CI641_027210 | Not Available | Positive | 5428244 - 5428624 | 14588.7 |
| rhs repeat protein | CI641_027215 | Not Available | Positive | 5428643 - 5432486 | 143879.0 |
| replication initiation protein | CI641_027220 | Not Available | Negative | 5432705 - 5433406 | 27262.8 |
| mobilization protein | CI641_027230 | Not Available | Negative | 5433939 - 5434229 | 10733.1 |
| conjugal transfer protein | CI641_027235 | Not Available | Positive | 5434400 - 5436547 | 81936.9 |
| is6-like element is6100 family transposase | CI641_027240 | Not Available | Positive | 5436617 - 5437381 | 29684.0 |
| hypothetical protein | CI641_027250 | Not Available | Negative | 5437572 - 5437928 | 12830.5 |
| tetr/acrr family transcriptional regulator | CI641_027255 | Not Available | Negative | 5437874 - 5438458 | 21629.4 |
| mfs transporter | CI641_027260 | Not Available | Negative | 5438458 - 5439696 | 40959.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





